Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 OR6D1P-202ENST00000641007 5290 ntBASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 AP004607.4-201ENST00000530158 1459 ntBASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD3Q9NX63 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHCHD3Q9NX63 AC008894.3-201ENST00000624324 3103 ntBASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD3Q9NX63 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHCHD3Q9NX63 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms