Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G1Q9HCP0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 AL353708.3-201ENST00000610272 989 ntBASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G1Q9HCP0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.7■□□□□ 0.91
CSNK1G1Q9HCP0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 AL353807.1-201ENST00000427475 662 ntBASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 C1QL1P1-201ENST00000568105 661 ntBASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 AF186192.3-201ENST00000583427 947 ntBASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CSNK1G1Q9HCP0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 AL596275.1-201ENST00000423464 877 ntBASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 TUBB8P6-201ENST00000436895 1288 ntBASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 AP001412.1-201ENST00000608405 714 ntBASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 AL049637.2-201ENST00000641778 930 ntBASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CSNK1G1Q9HCP0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSNK1G1Q9HCP0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G1Q9HCP0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G1Q9HCP0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms