Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 AC009237.14-201ENST00000609975 1594 ntBASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 AC026471.1-201ENST00000564629 3026 ntBASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF556Q9HAH1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
ZNF556Q9HAH1 LINC02228-203ENST00000641970 1355 ntBASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ZNF556Q9HAH1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 SLC7A5P1-201ENST00000568957 537 ntBASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 AL356652.1-201ENST00000615962 565 ntBASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ZNF556Q9HAH1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 AL031432.3-201ENST00000607698 485 ntBASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 AC110285.6-201ENST00000617652 491 ntBASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF556Q9HAH1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms