Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.78■□□□□ 0.92
ATXN3LQ9H3M9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.78■□□□□ 0.92
ATXN3LQ9H3M9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3LQ9H3M9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3LQ9H3M9 AC092667.1-201ENST00000434301 2586 ntBASIC20.78■□□□□ 0.92
ATXN3LQ9H3M9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3LQ9H3M9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 FAM210CP-201ENST00000445714 574 ntBASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
ATXN3LQ9H3M9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATXN3LQ9H3M9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.77■□□□□ 0.91
ATXN3LQ9H3M9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
ATXN3LQ9H3M9 LINC01006-201ENST00000333319 2292 ntBASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.76■□□□□ 0.91
ATXN3LQ9H3M9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 AC073314.1-201ENST00000568729 2216 ntBASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN3LQ9H3M9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN3LQ9H3M9 AC092720.2-201ENST00000602388 1665 ntBASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 KRT18P21-201ENST00000515767 1272 ntBASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN3LQ9H3M9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms