Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 PRORSD1P-201ENST00000295112 541 ntBASIC20.87■□□□□ 0.93
LHX5Q9H2C1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 POM121L13P-201ENST00000422362 380 ntBASIC20.87■□□□□ 0.93
LHX5Q9H2C1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 TREX1-205ENST00000625293 1783 ntBASIC20.87■□□□□ 0.93
LHX5Q9H2C1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.87■□□□□ 0.93
LHX5Q9H2C1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX5Q9H2C1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 AP003097.1-201ENST00000530657 1135 ntBASIC20.85■□□□□ 0.93
LHX5Q9H2C1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX5Q9H2C1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 AC026366.1-201ENST00000488803 879 ntBASIC20.84■□□□□ 0.93
LHX5Q9H2C1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LHX5Q9H2C1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.83■□□□□ 0.93
LHX5Q9H2C1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms