Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 AL773604.1-201ENST00000617417 272 ntBASIC18.97■□□□□ 0.63
SPTBN4Q9H254 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 CHCHD2P8-201ENST00000429873 447 ntBASIC18.97■□□□□ 0.63
SPTBN4Q9H254 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 AC011298.2-201ENST00000617989 482 ntBASIC18.97■□□□□ 0.63
SPTBN4Q9H254 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.97■□□□□ 0.63
SPTBN4Q9H254 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 BX276092.5-203ENST00000456199 560 ntBASIC18.96■□□□□ 0.63
SPTBN4Q9H254 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 AC004980.1-204ENST00000429707 299 ntBASIC18.96■□□□□ 0.63
SPTBN4Q9H254 PGAM5P1-201ENST00000518923 814 ntBASIC18.96■□□□□ 0.63
SPTBN4Q9H254 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SPTBN4Q9H254 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.95■□□□□ 0.62
SPTBN4Q9H254 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 HLA-J-203ENST00000494367 1087 ntBASIC18.95■□□□□ 0.62
SPTBN4Q9H254 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 GCSHP2-201ENST00000560971 527 ntBASIC18.95■□□□□ 0.62
SPTBN4Q9H254 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 PMS2P7-201ENST00000506558 1336 ntBASIC18.95■□□□□ 0.62
SPTBN4Q9H254 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 AC131212.4-201ENST00000623606 975 ntBASIC18.95■□□□□ 0.62
SPTBN4Q9H254 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SPTBN4Q9H254 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 PTBP1P-201ENST00000554374 1601 ntBASIC18.94■□□□□ 0.62
SPTBN4Q9H254 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTBN4Q9H254 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms