Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1EQ9GZS1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1EQ9GZS1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 POU5F1P3-201ENST00000428824 1078 ntBASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 AC069544.1-201ENST00000609399 999 ntBASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1EQ9GZS1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1EQ9GZS1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1EQ9GZS1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 AC006058.3-201ENST00000606217 1069 ntBASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1EQ9GZS1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms