Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 AC068338.2-201ENST00000563278 1430 ntBASIC20.02■□□□□ 0.79
PHACTR1Q9C0D0 AC093503.3-201ENST00000624917 2352 ntBASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 CNN2P6-201ENST00000439038 900 ntBASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.01■□□□□ 0.79
PHACTR1Q9C0D0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 MIR6821-201ENST00000617625 74 ntBASIC20■□□□□ 0.79
PHACTR1Q9C0D0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHACTR1Q9C0D0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 AC034268.1-201ENST00000441047 882 ntBASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.99■□□□□ 0.79
PHACTR1Q9C0D0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 AL138781.2-201ENST00000617896 1843 ntBASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHACTR1Q9C0D0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms