Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HMGA1P5-201ENST00000412453 271 ntBASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 AC117947.1-201ENST00000427448 529 ntBASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 RCC2P6-201ENST00000526625 1557 ntBASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 AC096733.2-201ENST00000609937 1394 ntBASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTFDC1Q9BY42 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 AC079834.2-201ENST00000609776 1949 ntBASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTFDC1Q9BY42 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 LINC01238-205ENST00000567549 1107 ntBASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 SLC25A1P4-201ENST00000567977 778 ntBASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 AC091076.1-201ENST00000610741 619 ntBASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 AL358472.4-201ENST00000633140 710 ntBASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 HLA-A-209ENST00000638375 975 ntBASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 KRT16P6-202ENST00000425692 1426 ntBASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.09■■□□□ 1.45
RTFDC1Q9BY42 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RTFDC1Q9BY42 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RTFDC1Q9BY42 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.08■■□□□ 1.44
RTFDC1Q9BY42 DPP3P2-201ENST00000416030 1696 ntBASIC24.08■■□□□ 1.44
RTFDC1Q9BY42 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RTFDC1Q9BY42 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RTFDC1Q9BY42 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
RTFDC1Q9BY42 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 AC011298.2-201ENST00000617989 482 ntBASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTFDC1Q9BY42 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 AL031133.1-201ENST00000406807 723 ntBASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms