Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AC007225.1-201ENST00000566331 1836 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 HCG11-201ENST00000411553 5696 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AL158047.1-201ENST00000445918 881 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 RPS2P52-201ENST00000469610 820 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 RPPH1-201ENST00000516869 333 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 C1QBPP2-201ENST00000528754 825 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 MTDHP1-201ENST00000605323 784 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 AL020996.1-203ENST00000536896 2307 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 PTBP1P-201ENST00000554374 1601 ntBASIC13.72□□□□□ -0.21
UPK3BQ9BT76 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 AC133681.1-201ENST00000465482 601 ntBASIC13.71□□□□□ -0.21
UPK3BQ9BT76 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 PRKY-204ENST00000533551 1019 ntBASIC13.71□□□□□ -0.21
UPK3BQ9BT76 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 AL121829.2-201ENST00000620908 328 ntBASIC13.71□□□□□ -0.21
UPK3BQ9BT76 FAM197Y4-202ENST00000622692 608 ntBASIC13.71□□□□□ -0.21
UPK3BQ9BT76 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 FP700111.2-201ENST00000619190 1892 ntBASIC13.71□□□□□ -0.21
UPK3BQ9BT76 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
UPK3BQ9BT76 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.71□□□□□ -0.22
UPK3BQ9BT76 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms