Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H4Q96RI1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.58■□□□□ 0.57
NR1H4Q96RI1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.58■□□□□ 0.56
NR1H4Q96RI1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.58■□□□□ 0.56
NR1H4Q96RI1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 AL117332.1-201ENST00000622628 974 ntBASIC18.57■□□□□ 0.56
NR1H4Q96RI1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.57■□□□□ 0.56
NR1H4Q96RI1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H4Q96RI1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 KRT16P3-201ENST00000439127 1283 ntBASIC18.56■□□□□ 0.56
NR1H4Q96RI1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H4Q96RI1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 BCL2-203ENST00000589955 5011 ntBASIC18.55■□□□□ 0.56
NR1H4Q96RI1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms