Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 TSPY7P-201ENST00000431358 1114 ntBASIC15.36■□□□□ 0.05
DUX3Q96PT4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 AL031963.3-201ENST00000606441 850 ntBASIC15.36■□□□□ 0.05
DUX3Q96PT4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUX3Q96PT4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.36■□□□□ 0.05
DUX3Q96PT4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 AC133681.1-201ENST00000465482 601 ntBASIC15.35■□□□□ 0.05
DUX3Q96PT4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 MIR4497-201ENST00000583208 89 ntBASIC15.35■□□□□ 0.05
DUX3Q96PT4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUX3Q96PT4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.35■□□□□ 0.05
DUX3Q96PT4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 RPS2P55-201ENST00000397318 883 ntBASIC15.34■□□□□ 0.05
DUX3Q96PT4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 AC107956.1-201ENST00000494359 873 ntBASIC15.34■□□□□ 0.05
DUX3Q96PT4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUX3Q96PT4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.34■□□□□ 0.05
DUX3Q96PT4 KRT8P17-201ENST00000453110 1448 ntBASIC15.34■□□□□ 0.05
DUX3Q96PT4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUX3Q96PT4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
DUX3Q96PT4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUX3Q96PT4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
DUX3Q96PT4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.33■□□□□ 0.05
DUX3Q96PT4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUX3Q96PT4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 RNF165-205ENST00000588679 2904 ntBASIC15.33■□□□□ 0.04
DUX3Q96PT4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms