Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HPS1Q92902 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
HPS1Q92902 AC006970.2-201ENST00000450065 779 ntBASIC17.96■□□□□ 0.47
HPS1Q92902 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.96■□□□□ 0.47
HPS1Q92902 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 PLK5-205ENST00000642079 1969 ntBASIC17.96■□□□□ 0.47
HPS1Q92902 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HPS1Q92902 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS1Q92902 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS1Q92902 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS1Q92902 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS1Q92902 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HPS1Q92902 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.95■□□□□ 0.46
HPS1Q92902 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS1Q92902 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HPS1Q92902 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS1Q92902 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.95■□□□□ 0.46
HPS1Q92902 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.95■□□□□ 0.46
HPS1Q92902 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS1Q92902 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS1Q92902 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.95■□□□□ 0.46
HPS1Q92902 AC011767.1-201ENST00000617410 1153 ntBASIC17.95■□□□□ 0.46
HPS1Q92902 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS1Q92902 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HPS1Q92902 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HPS1Q92902 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS1Q92902 AC005332.7-201ENST00000614046 2005 ntBASIC17.94■□□□□ 0.46
HPS1Q92902 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
HPS1Q92902 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.94■□□□□ 0.46
HPS1Q92902 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.94■□□□□ 0.46
HPS1Q92902 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.94■□□□□ 0.46
HPS1Q92902 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HPS1Q92902 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.94■□□□□ 0.46
HPS1Q92902 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS1Q92902 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.93■□□□□ 0.46
HPS1Q92902 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HPS1Q92902 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HPS1Q92902 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.93■□□□□ 0.46
HPS1Q92902 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS1Q92902 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS1Q92902 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HPS1Q92902 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.93■□□□□ 0.46
HPS1Q92902 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS1Q92902 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HPS1Q92902 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HPS1Q92902 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS1Q92902 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms