Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 GPX1P1-201ENST00000388829 606 ntBASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 SLC29A4P1-201ENST00000398760 971 ntBASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 AC009237.14-201ENST00000609975 1594 ntBASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 MIPEPP3-201ENST00000412105 444 ntBASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 AL158211.5-201ENST00000623583 2518 ntBASIC20.56■□□□□ 0.88
TRAF3IP1Q8TDR0 AP001271.2-201ENST00000624018 1556 ntBASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF3IP1Q8TDR0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 PHGDH-210ENST00000641115 1638 ntBASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRAF3IP1Q8TDR0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAF3IP1Q8TDR0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAF3IP1Q8TDR0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms