Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 FAM45BP-202ENST00000592932 1624 ntBASIC12.47□□□□□ -0.41
SVIPQ8NHG7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SVIPQ8NHG7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.46□□□□□ -0.41
SVIPQ8NHG7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 AC099521.2-201ENST00000619354 2036 ntBASIC12.46□□□□□ -0.41
SVIPQ8NHG7 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.46□□□□□ -0.41
SVIPQ8NHG7 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 AC068880.1-201ENST00000507289 2297 ntBASIC12.46□□□□□ -0.42
SVIPQ8NHG7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SVIPQ8NHG7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 AC015656.1-201ENST00000624209 3578 ntBASIC12.45□□□□□ -0.42
SVIPQ8NHG7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 LINC02199-201ENST00000506655 2702 ntBASIC12.45□□□□□ -0.42
SVIPQ8NHG7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SVIPQ8NHG7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms