Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 KRT16P6-202ENST00000425692 1426 ntBASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 AC120498.9-201ENST00000339021 3867 ntBASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS1Q8NFJ9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
BBS1Q8NFJ9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 AC007322.4-201ENST00000509611 723 ntBASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 AL162412.1-201ENST00000567129 965 ntBASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 NTF6G-201ENST00000591094 616 ntBASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 AC013268.1-206ENST00000638368 961 ntBASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 AC112229.1-201ENST00000639295 961 ntBASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 AP001271.2-201ENST00000624018 1556 ntBASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS1Q8NFJ9 KRT8P20-201ENST00000423953 1409 ntBASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 MCRIP2P1-201ENST00000394346 511 ntBASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS1Q8NFJ9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BBS1Q8NFJ9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
BBS1Q8NFJ9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms