Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC89Q8N998 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC89Q8N998 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CCDC89Q8N998 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC89Q8N998 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC89Q8N998 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC89Q8N998 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC89Q8N998 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 AC231657.2-201ENST00000624556 255 ntBASIC20.45■□□□□ 0.86
CCDC89Q8N998 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC89Q8N998 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC89Q8N998 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 AP001271.2-201ENST00000624018 1556 ntBASIC20.44■□□□□ 0.86
CCDC89Q8N998 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 HLA-G-202ENST00000376815 851 ntBASIC20.44■□□□□ 0.86
CCDC89Q8N998 HLA-G-203ENST00000376818 1127 ntBASIC20.44■□□□□ 0.86
CCDC89Q8N998 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 RARRES2P6-201ENST00000567333 442 ntBASIC20.44■□□□□ 0.86
CCDC89Q8N998 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 TNXA-203ENST00000507684 2038 ntBASIC20.44■□□□□ 0.86
CCDC89Q8N998 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC89Q8N998 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC89Q8N998 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 AC007322.1-201ENST00000426983 750 ntBASIC20.43■□□□□ 0.86
CCDC89Q8N998 AC026271.2-201ENST00000428091 497 ntBASIC20.43■□□□□ 0.86
CCDC89Q8N998 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC89Q8N998 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC89Q8N998 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 AL355472.2-201ENST00000422958 438 ntBASIC20.42■□□□□ 0.86
CCDC89Q8N998 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.42■□□□□ 0.86
CCDC89Q8N998 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms