Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.28■□□□□ 0.68
CPSF7Q8N684 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPSF7Q8N684 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPSF7Q8N684 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.27■□□□□ 0.68
CPSF7Q8N684 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.27■□□□□ 0.68
CPSF7Q8N684 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CPSF7Q8N684 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.27■□□□□ 0.68
CPSF7Q8N684 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPSF7Q8N684 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPSF7Q8N684 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPSF7Q8N684 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.27■□□□□ 0.67
CPSF7Q8N684 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPSF7Q8N684 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.26■□□□□ 0.67
CPSF7Q8N684 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 TSPY6P-201ENST00000448518 926 ntBASIC19.26■□□□□ 0.67
CPSF7Q8N684 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.26■□□□□ 0.67
CPSF7Q8N684 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPSF7Q8N684 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPSF7Q8N684 RBM17P2-201ENST00000616397 1405 ntBASIC19.25■□□□□ 0.67
CPSF7Q8N684 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 SLC7A5P1-201ENST00000568957 537 ntBASIC19.25■□□□□ 0.67
CPSF7Q8N684 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPSF7Q8N684 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.25■□□□□ 0.67
CPSF7Q8N684 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 GUSBP6-202ENST00000438529 1198 ntBASIC19.24■□□□□ 0.67
CPSF7Q8N684 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 TERF1P5-201ENST00000477545 1207 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms