Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 AL023875.1-201ENST00000640777 796 ntBASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC33Q8N5R6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC33Q8N5R6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 MTDHP1-201ENST00000605323 784 ntBASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC33Q8N5R6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 AC120498.8-201ENST00000614275 531 ntBASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC33Q8N5R6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms