Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD2Q8IV50 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LYSMD2Q8IV50 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.33■□□□□ 0.36
LYSMD2Q8IV50 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 AC133561.4-201ENST00000566112 224 ntBASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 AC011298.3-201ENST00000615796 283 ntBASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 AC006333.2-201ENST00000607957 2099 ntBASIC17.32■□□□□ 0.36
LYSMD2Q8IV50 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 AC009237.3-201ENST00000393279 1427 ntBASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 DUX4L19-201ENST00000557448 1267 ntBASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD2Q8IV50 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms