Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
PACS2Q86VP3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PACS2Q86VP3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.81■□□□□ 0.76
PACS2Q86VP3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
PACS2Q86VP3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PACS2Q86VP3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PACS2Q86VP3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.8■□□□□ 0.76
PACS2Q86VP3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PACS2Q86VP3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PACS2Q86VP3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 BX005040.4-201ENST00000637145 1518 ntBASIC19.79■□□□□ 0.76
PACS2Q86VP3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.79■□□□□ 0.76
PACS2Q86VP3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PACS2Q86VP3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.79■□□□□ 0.76
PACS2Q86VP3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PACS2Q86VP3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PACS2Q86VP3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 AC067852.2-201ENST00000590513 2313 ntBASIC19.78■□□□□ 0.76
PACS2Q86VP3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 LINC02228-203ENST00000641970 1355 ntBASIC19.78■□□□□ 0.76
PACS2Q86VP3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PACS2Q86VP3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
PACS2Q86VP3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 AC087623.3-201ENST00000607047 1098 ntBASIC19.77■□□□□ 0.76
PACS2Q86VP3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PACS2Q86VP3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.77■□□□□ 0.76
PACS2Q86VP3 TREX1-205ENST00000625293 1783 ntBASIC19.77■□□□□ 0.76
PACS2Q86VP3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.75
PACS2Q86VP3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.77■□□□□ 0.75
PACS2Q86VP3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
PACS2Q86VP3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.76■□□□□ 0.75
PACS2Q86VP3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
PACS2Q86VP3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms