Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
SYVN1Q86TM6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 AC060766.5-201ENST00000590539 871 ntBASIC19.4■□□□□ 0.7
SYVN1Q86TM6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 HLA-B-256ENST00000639848 1089 ntBASIC19.4■□□□□ 0.7
SYVN1Q86TM6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.4■□□□□ 0.7
SYVN1Q86TM6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SYVN1Q86TM6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SYVN1Q86TM6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.7
SYVN1Q86TM6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 AC142381.4-202ENST00000563973 229 ntBASIC19.39■□□□□ 0.69
SYVN1Q86TM6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.39■□□□□ 0.69
SYVN1Q86TM6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 KRT18P68-201ENST00000392293 1000 ntBASIC19.38■□□□□ 0.69
SYVN1Q86TM6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 AC105020.6-201ENST00000621523 1217 ntBASIC19.38■□□□□ 0.69
SYVN1Q86TM6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYVN1Q86TM6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYVN1Q86TM6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.37■□□□□ 0.69
SYVN1Q86TM6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SYVN1Q86TM6 TREX1-205ENST00000625293 1783 ntBASIC19.37■□□□□ 0.69
SYVN1Q86TM6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYVN1Q86TM6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms