Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 AC087289.5-201ENST00000586076 3175 ntBASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP1BQ7LBR1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 KRT8P36-201ENST00000489121 1440 ntBASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP1BQ7LBR1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 PLK5-205ENST00000642079 1969 ntBASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 AC026366.1-201ENST00000488803 879 ntBASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 AC006128.1-201ENST00000624704 1661 ntBASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP1BQ7LBR1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP1BQ7LBR1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 KRT17P3-201ENST00000420566 1262 ntBASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms