Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 AL158211.5-201ENST00000623583 2518 ntBASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA1Q6ZS62 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 AL121829.2-201ENST00000620908 328 ntBASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 AL121906.2-201ENST00000621597 723 ntBASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA1Q6ZS62 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COLCA1Q6ZS62 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 AC008403.3-201ENST00000598924 454 ntBASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA1Q6ZS62 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA1Q6ZS62 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA1Q6ZS62 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA1Q6ZS62 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA1Q6ZS62 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms