Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 AC069152.1-201ENST00000438030 544 ntBASIC23.59■■□□□ 1.37
RNF20Q5VTR2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 AC142086.2-201ENST00000569753 217 ntBASIC23.59■■□□□ 1.37
RNF20Q5VTR2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 AC092368.3-202ENST00000574180 1591 ntBASIC23.59■■□□□ 1.37
RNF20Q5VTR2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 AL158211.5-201ENST00000623583 2518 ntBASIC23.59■■□□□ 1.37
RNF20Q5VTR2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF20Q5VTR2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 AC116351.2-201ENST00000606540 1585 ntBASIC23.58■■□□□ 1.37
RNF20Q5VTR2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF20Q5VTR2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF20Q5VTR2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF20Q5VTR2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.58■■□□□ 1.36
RNF20Q5VTR2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 AC018553.1-201ENST00000616682 1458 ntBASIC23.57■■□□□ 1.36
RNF20Q5VTR2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 AC098934.4-201ENST00000564127 592 ntBASIC23.57■■□□□ 1.36
RNF20Q5VTR2 AC060766.5-201ENST00000590539 871 ntBASIC23.57■■□□□ 1.36
RNF20Q5VTR2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 TREX1-205ENST00000625293 1783 ntBASIC23.57■■□□□ 1.36
RNF20Q5VTR2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
RNF20Q5VTR2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 AC083880.1-201ENST00000608266 535 ntBASIC23.56■■□□□ 1.36
RNF20Q5VTR2 AC006557.6-201ENST00000623071 864 ntBASIC23.56■■□□□ 1.36
RNF20Q5VTR2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF20Q5VTR2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms