Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 NOC2LP2-201ENST00000407594 1944 ntBASIC18.03■□□□□ 0.48
RBM48Q5RL73 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.03■□□□□ 0.48
RBM48Q5RL73 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBM48Q5RL73 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBM48Q5RL73 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.03■□□□□ 0.48
RBM48Q5RL73 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBM48Q5RL73 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.03■□□□□ 0.48
RBM48Q5RL73 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RBM48Q5RL73 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 AP000997.3-201ENST00000623333 2250 ntBASIC18.02■□□□□ 0.48
RBM48Q5RL73 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RBM48Q5RL73 AC006333.2-201ENST00000607957 2099 ntBASIC18.02■□□□□ 0.48
RBM48Q5RL73 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RBM48Q5RL73 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RBM48Q5RL73 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RBM48Q5RL73 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.02■□□□□ 0.48
RBM48Q5RL73 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.02■□□□□ 0.47
RBM48Q5RL73 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RBM48Q5RL73 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RBM48Q5RL73 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RBM48Q5RL73 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RBM48Q5RL73 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 AL133373.2-201ENST00000623187 2828 ntBASIC18.01■□□□□ 0.47
RBM48Q5RL73 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.01■□□□□ 0.47
RBM48Q5RL73 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RBM48Q5RL73 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18■□□□□ 0.47
RBM48Q5RL73 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 AL161938.1-201ENST00000569833 2180 ntBASIC18■□□□□ 0.47
RBM48Q5RL73 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RBM48Q5RL73 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RBM48Q5RL73 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18■□□□□ 0.47
RBM48Q5RL73 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 NOC2LP1-202ENST00000452600 2235 ntBASIC17.99■□□□□ 0.47
RBM48Q5RL73 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 BICD1-207ENST00000551848 1962 ntBASIC17.99■□□□□ 0.47
RBM48Q5RL73 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RBM48Q5RL73 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.99■□□□□ 0.47
RBM48Q5RL73 BX842568.3-201ENST00000418104 571 ntBASIC17.99■□□□□ 0.47
RBM48Q5RL73 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.99■□□□□ 0.47
RBM48Q5RL73 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.99■□□□□ 0.47
RBM48Q5RL73 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.99■□□□□ 0.47
RBM48Q5RL73 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.99■□□□□ 0.47
RBM48Q5RL73 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBM48Q5RL73 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms