Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
HLA-BQ31612 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-BQ31612 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-BQ31612 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 HMGA1P5-201ENST00000412453 271 ntBASIC19.24■□□□□ 0.67
HLA-BQ31612 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-BQ31612 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-BQ31612 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HLA-BQ31612 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HLA-BQ31612 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-BQ31612 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HLA-BQ31612 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-BQ31612 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-BQ31612 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HLA-BQ31612 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 AC117947.1-201ENST00000427448 529 ntBASIC19.23■□□□□ 0.67
HLA-BQ31612 AC008040.2-201ENST00000461049 708 ntBASIC19.23■□□□□ 0.67
HLA-BQ31612 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-BQ31612 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-BQ31612 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-BQ31612 AL358472.4-201ENST00000633140 710 ntBASIC19.23■□□□□ 0.67
HLA-BQ31612 AC116562.4-202ENST00000641738 218 ntBASIC19.23■□□□□ 0.67
HLA-BQ31612 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-BQ31612 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-BQ31612 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-BQ31612 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.22■□□□□ 0.67
HLA-BQ31612 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 EP400NL-214ENST00000641289 2402 ntBASIC19.22■□□□□ 0.67
HLA-BQ31612 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HLA-BQ31612 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.22■□□□□ 0.67
HLA-BQ31612 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-BQ31612 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-BQ31612 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.22■□□□□ 0.67
HLA-BQ31612 AC004951.3-201ENST00000418645 1148 ntBASIC19.22■□□□□ 0.67
HLA-BQ31612 UPK3BP1-201ENST00000428678 509 ntBASIC19.22■□□□□ 0.67
HLA-BQ31612 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HLA-BQ31612 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-BQ31612 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
HLA-BQ31612 AC139887.4-201ENST00000607877 719 ntBASIC19.22■□□□□ 0.67
HLA-BQ31612 AC091076.1-201ENST00000610741 619 ntBASIC19.22■□□□□ 0.67
HLA-BQ31612 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-BQ31612 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-BQ31612 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-BQ31612 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HLA-BQ31612 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HLA-BQ31612 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-BQ31612 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-BQ31612 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-BQ31612 MFAP1P1-201ENST00000442257 1255 ntBASIC19.21■□□□□ 0.67
HLA-BQ31612 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-BQ31612 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-BQ31612 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-BQ31612 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HLA-BQ31612 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HLA-BQ31612 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-BQ31612 HLA-A-209ENST00000638375 975 ntBASIC19.21■□□□□ 0.67
HLA-BQ31612 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-BQ31612 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 PHGDH-210ENST00000641115 1638 ntBASIC19.21■□□□□ 0.67
HLA-BQ31612 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-BQ31612 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-BQ31612 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-BQ31612 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-BQ31612 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-BQ31612 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-BQ31612 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms