Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS1BP61024 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.8□□□□□ -0.2
CKS1BP61024 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CKS1BP61024 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CKS1BP61024 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 AL049812.1-201ENST00000432563 2267 ntBASIC13.79□□□□□ -0.2
CKS1BP61024 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CKS1BP61024 MIR4466-201ENST00000606121 54 ntBASIC13.79□□□□□ -0.2
CKS1BP61024 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.79□□□□□ -0.2
CKS1BP61024 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.79□□□□□ -0.2
CKS1BP61024 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CKS1BP61024 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
CKS1BP61024 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CKS1BP61024 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.79□□□□□ -0.2
CKS1BP61024 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.79□□□□□ -0.2
CKS1BP61024 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CKS1BP61024 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS1BP61024 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CKS1BP61024 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.79□□□□□ -0.2
CKS1BP61024 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 AC027702.1-201ENST00000563810 1770 ntBASIC13.78□□□□□ -0.2
CKS1BP61024 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CKS1BP61024 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CKS1BP61024 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CKS1BP61024 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.78□□□□□ -0.2
CKS1BP61024 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.78□□□□□ -0.2
CKS1BP61024 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 AC233992.3-201ENST00000607491 485 ntBASIC13.78□□□□□ -0.2
CKS1BP61024 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
CKS1BP61024 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.78□□□□□ -0.2
CKS1BP61024 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS1BP61024 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.78□□□□□ -0.2
CKS1BP61024 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS1BP61024 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CKS1BP61024 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS1BP61024 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CKS1BP61024 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS1BP61024 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS1BP61024 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CKS1BP61024 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CKS1BP61024 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.77□□□□□ -0.21
CKS1BP61024 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CKS1BP61024 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS1BP61024 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CKS1BP61024 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CKS1BP61024 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.76□□□□□ -0.21
CKS1BP61024 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.76□□□□□ -0.21
CKS1BP61024 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.76□□□□□ -0.21
CKS1BP61024 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS1BP61024 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS1BP61024 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS1BP61024 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS1BP61024 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS1BP61024 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.76□□□□□ -0.21
CKS1BP61024 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 621.8 ms