Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-5P52952 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-5P52952 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-5P52952 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NKX2-5P52952 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-5P52952 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-5P52952 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-5P52952 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX2-5P52952 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX2-5P52952 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NKX2-5P52952 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NKX2-5P52952 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX2-5P52952 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NKX2-5P52952 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX2-5P52952 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
NKX2-5P52952 AC080080.1-201ENST00000625121 2420 ntBASIC16.87■□□□□ 0.29
NKX2-5P52952 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-5P52952 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX2-5P52952 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.86■□□□□ 0.29
NKX2-5P52952 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX2-5P52952 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NKX2-5P52952 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NKX2-5P52952 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NKX2-5P52952 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NKX2-5P52952 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.86■□□□□ 0.29
NKX2-5P52952 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX2-5P52952 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NKX2-5P52952 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-5P52952 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-5P52952 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-5P52952 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-5P52952 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-5P52952 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-5P52952 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 ZNRF2P2-203ENST00000454624 420 ntBASIC16.85■□□□□ 0.29
NKX2-5P52952 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-5P52952 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NKX2-5P52952 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.85■□□□□ 0.29
NKX2-5P52952 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-5P52952 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 MKRN4P-201ENST00000444706 1521 ntBASIC16.85■□□□□ 0.29
NKX2-5P52952 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-5P52952 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-5P52952 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX2-5P52952 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX2-5P52952 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.84■□□□□ 0.29
NKX2-5P52952 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.84■□□□□ 0.29
NKX2-5P52952 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-5P52952 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NKX2-5P52952 AL031602.1-201ENST00000633169 911 ntBASIC16.84■□□□□ 0.29
NKX2-5P52952 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NKX2-5P52952 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NKX2-5P52952 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms