Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.15■■□□□ 1.62
COL15A1P39059 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
COL15A1P39059 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL15A1P39059 AC011506.1-201ENST00000474329 610 ntBASIC25.15■■□□□ 1.62
COL15A1P39059 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL15A1P39059 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.15■■□□□ 1.62
COL15A1P39059 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL15A1P39059 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.15■■□□□ 1.62
COL15A1P39059 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL15A1P39059 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL15A1P39059 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL15A1P39059 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.14■■□□□ 1.62
COL15A1P39059 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.14■■□□□ 1.62
COL15A1P39059 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL15A1P39059 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL15A1P39059 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL15A1P39059 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.14■■□□□ 1.62
COL15A1P39059 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL15A1P39059 TSPY14P-201ENST00000303979 915 ntBASIC25.14■■□□□ 1.61
COL15A1P39059 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL15A1P39059 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.14■■□□□ 1.61
COL15A1P39059 ECEL1P2-202ENST00000465689 757 ntBASIC25.14■■□□□ 1.61
COL15A1P39059 KRT18P16-201ENST00000510337 1294 ntBASIC25.14■■□□□ 1.61
COL15A1P39059 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL15A1P39059 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.14■■□□□ 1.61
COL15A1P39059 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.61
COL15A1P39059 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
COL15A1P39059 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
COL15A1P39059 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.14■■□□□ 1.61
COL15A1P39059 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL15A1P39059 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL15A1P39059 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.14■■□□□ 1.61
COL15A1P39059 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.14■■□□□ 1.61
COL15A1P39059 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.13■■□□□ 1.61
COL15A1P39059 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 TFP1-202ENST00000475455 1573 ntBASIC25.13■■□□□ 1.61
COL15A1P39059 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.13■■□□□ 1.61
COL15A1P39059 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL15A1P39059 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.13■■□□□ 1.61
COL15A1P39059 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.13■■□□□ 1.61
COL15A1P39059 EGLN1P1-201ENST00000531623 762 ntBASIC25.13■■□□□ 1.61
COL15A1P39059 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.13■■□□□ 1.61
COL15A1P39059 DPP3P2-201ENST00000416030 1696 ntBASIC25.13■■□□□ 1.61
COL15A1P39059 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
COL15A1P39059 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
COL15A1P39059 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.12■■□□□ 1.61
COL15A1P39059 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.12■■□□□ 1.61
COL15A1P39059 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.12■■□□□ 1.61
COL15A1P39059 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.12■■□□□ 1.61
COL15A1P39059 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL15A1P39059 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.11■■□□□ 1.61
COL15A1P39059 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.11■■□□□ 1.61
COL15A1P39059 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.11■■□□□ 1.61
COL15A1P39059 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL15A1P39059 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
COL15A1P39059 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.11■■□□□ 1.61
COL15A1P39059 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.1■■□□□ 1.61
COL15A1P39059 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 AC087388.1-201ENST00000571370 1112 ntBASIC25.1■■□□□ 1.61
COL15A1P39059 FAM87A-204ENST00000613235 858 ntBASIC25.1■■□□□ 1.61
COL15A1P39059 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL15A1P39059 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.1■■□□□ 1.61
COL15A1P39059 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.09■■□□□ 1.61
COL15A1P39059 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.09■■□□□ 1.61
COL15A1P39059 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL15A1P39059 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms