Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX11P35716 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX11P35716 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX11P35716 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SOX11P35716 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 AC098818.2-201ENST00000564925 2320 ntBASIC19.23■□□□□ 0.67
SOX11P35716 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.23■□□□□ 0.67
SOX11P35716 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SOX11P35716 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.23■□□□□ 0.67
SOX11P35716 AC083880.1-201ENST00000608266 535 ntBASIC19.23■□□□□ 0.67
SOX11P35716 FAM21FP-204ENST00000608637 956 ntBASIC19.23■□□□□ 0.67
SOX11P35716 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SOX11P35716 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.23■□□□□ 0.67
SOX11P35716 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SOX11P35716 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.23■□□□□ 0.67
SOX11P35716 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SOX11P35716 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX11P35716 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.23■□□□□ 0.67
SOX11P35716 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX11P35716 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SOX11P35716 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX11P35716 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.22■□□□□ 0.67
SOX11P35716 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.22■□□□□ 0.67
SOX11P35716 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX11P35716 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SOX11P35716 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX11P35716 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX11P35716 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.21■□□□□ 0.67
SOX11P35716 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX11P35716 AC091874.3-201ENST00000512672 1195 ntBASIC19.21■□□□□ 0.67
SOX11P35716 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.21■□□□□ 0.67
SOX11P35716 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX11P35716 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SOX11P35716 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.21■□□□□ 0.67
SOX11P35716 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX11P35716 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SOX11P35716 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.21■□□□□ 0.66
SOX11P35716 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SOX11P35716 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SOX11P35716 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX11P35716 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX11P35716 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX11P35716 FAM201B-201ENST00000458407 597 ntBASIC19.2■□□□□ 0.66
SOX11P35716 RNA5SP413-201ENST00000516373 109 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms