Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NEFHP1-201ENST00000412845 2629 ntBASIC19.94■□□□□ 0.78
RPA3P35244 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.94■□□□□ 0.78
RPA3P35244 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.94■□□□□ 0.78
RPA3P35244 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.94■□□□□ 0.78
RPA3P35244 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 AC005181.1-201ENST00000604782 1256 ntBASIC19.94■□□□□ 0.78
RPA3P35244 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.94■□□□□ 0.78
RPA3P35244 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPA3P35244 AC068338.2-201ENST00000563278 1430 ntBASIC19.93■□□□□ 0.78
RPA3P35244 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.93■□□□□ 0.78
RPA3P35244 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
RPA3P35244 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.93■□□□□ 0.78
RPA3P35244 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RPA3P35244 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.93■□□□□ 0.78
RPA3P35244 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.93■□□□□ 0.78
RPA3P35244 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.93■□□□□ 0.78
RPA3P35244 AL162412.1-201ENST00000567129 965 ntBASIC19.93■□□□□ 0.78
RPA3P35244 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.93■□□□□ 0.78
RPA3P35244 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.93■□□□□ 0.78
RPA3P35244 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPA3P35244 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.92■□□□□ 0.78
RPA3P35244 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RPA3P35244 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPA3P35244 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RPA3P35244 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RPA3P35244 AC008694.1-202ENST00000636953 945 ntBASIC19.92■□□□□ 0.78
RPA3P35244 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.92■□□□□ 0.78
RPA3P35244 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPA3P35244 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.92■□□□□ 0.78
RPA3P35244 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RPA3P35244 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPA3P35244 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPA3P35244 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
RPA3P35244 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.91■□□□□ 0.78
RPA3P35244 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.91■□□□□ 0.78
RPA3P35244 CYP2T1P-201ENST00000432607 1285 ntBASIC19.91■□□□□ 0.78
RPA3P35244 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.91■□□□□ 0.78
RPA3P35244 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 AC069236.1-201ENST00000604339 616 ntBASIC19.91■□□□□ 0.78
RPA3P35244 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RPA3P35244 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPA3P35244 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms