Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHRNA3P32297 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 PGM5P4-201ENST00000421970 445 ntBASIC20.8■□□□□ 0.92
CHRNA3P32297 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHRNA3P32297 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHRNA3P32297 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.8■□□□□ 0.92
CHRNA3P32297 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.8■□□□□ 0.92
CHRNA3P32297 MYC-209ENST00000641252 345 ntBASIC20.8■□□□□ 0.92
CHRNA3P32297 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CHRNA3P32297 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA3P32297 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHRNA3P32297 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHRNA3P32297 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHRNA3P32297 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 AP000974.1-201ENST00000623909 2387 ntBASIC20.79■□□□□ 0.92
CHRNA3P32297 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 KRT18P68-201ENST00000392293 1000 ntBASIC20.79■□□□□ 0.92
CHRNA3P32297 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHRNA3P32297 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 CYP21A1P-202ENST00000354927 1481 ntBASIC20.79■□□□□ 0.92
CHRNA3P32297 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRNA3P32297 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA3P32297 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA3P32297 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CHRNA3P32297 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHRNA3P32297 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRNA3P32297 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA3P32297 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.78■□□□□ 0.92
CHRNA3P32297 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA3P32297 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA3P32297 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.78■□□□□ 0.92
CHRNA3P32297 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CHRNA3P32297 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA3P32297 AC083880.1-201ENST00000608266 535 ntBASIC20.78■□□□□ 0.92
CHRNA3P32297 AL589743.5-201ENST00000616611 1050 ntBASIC20.78■□□□□ 0.92
CHRNA3P32297 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA3P32297 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA3P32297 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNA3P32297 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.77■□□□□ 0.92
CHRNA3P32297 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHRNA3P32297 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNA3P32297 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.77■□□□□ 0.92
CHRNA3P32297 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.77■□□□□ 0.92
CHRNA3P32297 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 AL356652.1-201ENST00000615962 565 ntBASIC20.77■□□□□ 0.92
CHRNA3P32297 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNA3P32297 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA3P32297 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHRNA3P32297 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CHRNA3P32297 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHRNA3P32297 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.76■□□□□ 0.91
CHRNA3P32297 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHRNA3P32297 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNA3P32297 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHRNA3P32297 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.76■□□□□ 0.91
CHRNA3P32297 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNA3P32297 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.76■□□□□ 0.91
CHRNA3P32297 AC087633.2-202ENST00000565166 1439 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms