Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PTPN6P29350 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PTPN6P29350 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN6P29350 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN6P29350 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
PTPN6P29350 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN6P29350 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN6P29350 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTPN6P29350 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN6P29350 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTPN6P29350 BX276092.2-201ENST00000417668 665 ntBASIC18.73■□□□□ 0.59
PTPN6P29350 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN6P29350 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.73■□□□□ 0.59
PTPN6P29350 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN6P29350 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN6P29350 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTPN6P29350 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPN6P29350 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 KRT18P68-201ENST00000392293 1000 ntBASIC18.72■□□□□ 0.59
PTPN6P29350 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPN6P29350 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPN6P29350 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PTPN6P29350 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 KRT8P20-201ENST00000423953 1409 ntBASIC18.72■□□□□ 0.59
PTPN6P29350 KRT16P6-202ENST00000425692 1426 ntBASIC18.72■□□□□ 0.59
PTPN6P29350 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 AP001271.2-201ENST00000624018 1556 ntBASIC18.72■□□□□ 0.59
PTPN6P29350 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN6P29350 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN6P29350 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN6P29350 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN6P29350 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN6P29350 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 AC073210.2-201ENST00000430369 194 ntBASIC18.71■□□□□ 0.59
PTPN6P29350 AC069152.1-201ENST00000438030 544 ntBASIC18.71■□□□□ 0.59
PTPN6P29350 AC098934.4-201ENST00000564127 592 ntBASIC18.71■□□□□ 0.59
PTPN6P29350 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN6P29350 MIR4758-201ENST00000577688 71 ntBASIC18.71■□□□□ 0.59
PTPN6P29350 AC092118.2-201ENST00000613495 667 ntBASIC18.71■□□□□ 0.59
PTPN6P29350 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTPN6P29350 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN6P29350 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTPN6P29350 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
PTPN6P29350 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN6P29350 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
PTPN6P29350 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.71■□□□□ 0.58
PTPN6P29350 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN6P29350 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN6P29350 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTPN6P29350 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN6P29350 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms