Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 LIN28AP1-201ENST00000429574 405 ntBASIC19.44■□□□□ 0.7
CD27P26842 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD27P26842 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.44■□□□□ 0.7
CD27P26842 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.44■□□□□ 0.7
CD27P26842 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.44■□□□□ 0.7
CD27P26842 AC130371.2-201ENST00000619443 611 ntBASIC19.44■□□□□ 0.7
CD27P26842 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD27P26842 AC026310.3-201ENST00000625186 2373 ntBASIC19.44■□□□□ 0.7
CD27P26842 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CD27P26842 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD27P26842 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD27P26842 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.43■□□□□ 0.7
CD27P26842 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CD27P26842 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CD27P26842 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.43■□□□□ 0.7
CD27P26842 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CD27P26842 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.43■□□□□ 0.7
CD27P26842 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CD27P26842 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.43■□□□□ 0.7
CD27P26842 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.43■□□□□ 0.7
CD27P26842 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.43■□□□□ 0.7
CD27P26842 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.43■□□□□ 0.7
CD27P26842 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.43■□□□□ 0.7
CD27P26842 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.43■□□□□ 0.7
CD27P26842 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CD27P26842 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD27P26842 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.42■□□□□ 0.7
CD27P26842 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.42■□□□□ 0.7
CD27P26842 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CD27P26842 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.42■□□□□ 0.7
CD27P26842 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.42■□□□□ 0.7
CD27P26842 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 AC128688.1-201ENST00000487626 519 ntBASIC19.42■□□□□ 0.7
CD27P26842 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CD27P26842 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.42■□□□□ 0.7
CD27P26842 AP000692.2-201ENST00000608391 879 ntBASIC19.42■□□□□ 0.7
CD27P26842 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CD27P26842 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CD27P26842 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.42■□□□□ 0.7
CD27P26842 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD27P26842 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CD27P26842 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CD27P26842 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.41■□□□□ 0.7
CD27P26842 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 ATP5G1P1-201ENST00000448724 379 ntBASIC19.41■□□□□ 0.7
CD27P26842 AC104076.2-201ENST00000448912 469 ntBASIC19.41■□□□□ 0.7
CD27P26842 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 ECEL1P2-202ENST00000465689 757 ntBASIC19.41■□□□□ 0.7
CD27P26842 DUX4L26-201ENST00000489078 1255 ntBASIC19.41■□□□□ 0.7
CD27P26842 AC010203.1-204ENST00000548782 407 ntBASIC19.41■□□□□ 0.7
CD27P26842 SLC25A1P4-201ENST00000567977 778 ntBASIC19.41■□□□□ 0.7
CD27P26842 HLA-A-209ENST00000638375 975 ntBASIC19.41■□□□□ 0.7
CD27P26842 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CD27P26842 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.41■□□□□ 0.7
CD27P26842 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.41■□□□□ 0.7
CD27P26842 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD27P26842 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
CD27P26842 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CD27P26842 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.4■□□□□ 0.7
CD27P26842 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.4■□□□□ 0.7
CD27P26842 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CD27P26842 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD27P26842 AC011298.2-201ENST00000617989 482 ntBASIC19.4■□□□□ 0.7
CD27P26842 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.4■□□□□ 0.7
CD27P26842 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD27P26842 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.4■□□□□ 0.7
CD27P26842 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms