Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.68■□□□□ 0.74
XRCC1P18887 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
XRCC1P18887 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.68■□□□□ 0.74
XRCC1P18887 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
XRCC1P18887 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.68■□□□□ 0.74
XRCC1P18887 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
XRCC1P18887 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
XRCC1P18887 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.68■□□□□ 0.74
XRCC1P18887 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 KRT17P3-201ENST00000420566 1262 ntBASIC19.68■□□□□ 0.74
XRCC1P18887 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.68■□□□□ 0.74
XRCC1P18887 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.68■□□□□ 0.74
XRCC1P18887 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.68■□□□□ 0.74
XRCC1P18887 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.68■□□□□ 0.74
XRCC1P18887 AC008687.6-201ENST00000596318 630 ntBASIC19.68■□□□□ 0.74
XRCC1P18887 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
XRCC1P18887 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRCC1P18887 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.67■□□□□ 0.74
XRCC1P18887 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
XRCC1P18887 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.67■□□□□ 0.74
XRCC1P18887 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.67■□□□□ 0.74
XRCC1P18887 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.67■□□□□ 0.74
XRCC1P18887 AC073648.6-201ENST00000641589 218 ntBASIC19.67■□□□□ 0.74
XRCC1P18887 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.67■□□□□ 0.74
XRCC1P18887 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.67■□□□□ 0.74
XRCC1P18887 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.67■□□□□ 0.74
XRCC1P18887 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
XRCC1P18887 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.67■□□□□ 0.74
XRCC1P18887 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.67■□□□□ 0.74
XRCC1P18887 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRCC1P18887 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
XRCC1P18887 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.66■□□□□ 0.74
XRCC1P18887 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
XRCC1P18887 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
XRCC1P18887 AL390719.1-204ENST00000412397 1219 ntBASIC19.66■□□□□ 0.74
XRCC1P18887 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.66■□□□□ 0.74
XRCC1P18887 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.66■□□□□ 0.74
XRCC1P18887 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 TCF3P1-201ENST00000423021 1937 ntBASIC19.66■□□□□ 0.74
XRCC1P18887 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
XRCC1P18887 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRCC1P18887 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
XRCC1P18887 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
XRCC1P18887 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
XRCC1P18887 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
XRCC1P18887 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 AC023632.3-201ENST00000521633 145 ntBASIC19.65■□□□□ 0.74
XRCC1P18887 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.65■□□□□ 0.74
XRCC1P18887 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
XRCC1P18887 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRCC1P18887 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.65■□□□□ 0.74
XRCC1P18887 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.65■□□□□ 0.74
XRCC1P18887 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
XRCC1P18887 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms