Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.61■□□□□ 0.89
PSMC3P17980 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.61■□□□□ 0.89
PSMC3P17980 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.61■□□□□ 0.89
PSMC3P17980 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.61■□□□□ 0.89
PSMC3P17980 AL049796.1-201ENST00000565336 1766 ntBASIC20.61■□□□□ 0.89
PSMC3P17980 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.61■□□□□ 0.89
PSMC3P17980 AC079598.2-202ENST00000546624 1451 ntBASIC20.61■□□□□ 0.89
PSMC3P17980 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 KRT8P20-201ENST00000423953 1409 ntBASIC20.61■□□□□ 0.89
PSMC3P17980 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.61■□□□□ 0.89
PSMC3P17980 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMC3P17980 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.6■□□□□ 0.89
PSMC3P17980 PTBP1P-201ENST00000554374 1601 ntBASIC20.6■□□□□ 0.89
PSMC3P17980 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PSMC3P17980 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PSMC3P17980 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMC3P17980 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PSMC3P17980 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMC3P17980 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.6■□□□□ 0.89
PSMC3P17980 AP000525.1-201ENST00000608286 694 ntBASIC20.6■□□□□ 0.89
PSMC3P17980 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMC3P17980 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PSMC3P17980 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMC3P17980 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.59■□□□□ 0.89
PSMC3P17980 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PSMC3P17980 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.59■□□□□ 0.89
PSMC3P17980 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.59■□□□□ 0.89
PSMC3P17980 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.59■□□□□ 0.89
PSMC3P17980 AL445228.2-201ENST00000605589 952 ntBASIC20.59■□□□□ 0.89
PSMC3P17980 AC005363.2-201ENST00000618631 242 ntBASIC20.59■□□□□ 0.89
PSMC3P17980 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.59■□□□□ 0.89
PSMC3P17980 AC092865.7-201ENST00000641832 219 ntBASIC20.59■□□□□ 0.89
PSMC3P17980 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMC3P17980 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSMC3P17980 RNF165-205ENST00000588679 2904 ntBASIC20.58■□□□□ 0.89
PSMC3P17980 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.58■□□□□ 0.89
PSMC3P17980 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSMC3P17980 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.58■□□□□ 0.89
PSMC3P17980 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PSMC3P17980 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.58■□□□□ 0.89
PSMC3P17980 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PSMC3P17980 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSMC3P17980 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSMC3P17980 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.58■□□□□ 0.89
PSMC3P17980 KSR1P1-201ENST00000446298 240 ntBASIC20.58■□□□□ 0.89
PSMC3P17980 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.58■□□□□ 0.89
PSMC3P17980 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.58■□□□□ 0.89
PSMC3P17980 AL031963.3-201ENST00000606441 850 ntBASIC20.58■□□□□ 0.89
PSMC3P17980 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PSMC3P17980 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.58■□□□□ 0.88
PSMC3P17980 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PSMC3P17980 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PSMC3P17980 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PSMC3P17980 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 MIR1238-201ENST00000408483 83 ntBASIC20.57■□□□□ 0.88
PSMC3P17980 NIFKP9-201ENST00000419265 221 ntBASIC20.57■□□□□ 0.88
PSMC3P17980 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.57■□□□□ 0.88
PSMC3P17980 KRT8P9-201ENST00000558927 1449 ntBASIC20.57■□□□□ 0.88
PSMC3P17980 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.57■□□□□ 0.88
PSMC3P17980 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.57■□□□□ 0.88
PSMC3P17980 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 CR392000.1-201ENST00000624770 1228 ntBASIC20.57■□□□□ 0.88
PSMC3P17980 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMC3P17980 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PSMC3P17980 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PSMC3P17980 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.56■□□□□ 0.88
PSMC3P17980 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSMC3P17980 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMC3P17980 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PSMC3P17980 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMC3P17980 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms