Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.3■□□□□ 0.36
UBCP0CG48 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.3■□□□□ 0.36
UBCP0CG48 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.3■□□□□ 0.36
UBCP0CG48 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.3■□□□□ 0.36
UBCP0CG48 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.3■□□□□ 0.36
UBCP0CG48 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.3■□□□□ 0.36
UBCP0CG48 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.3■□□□□ 0.36
UBCP0CG48 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
UBCP0CG48 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.3■□□□□ 0.36
UBCP0CG48 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBCP0CG48 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBCP0CG48 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.29■□□□□ 0.36
UBCP0CG48 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
UBCP0CG48 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 KRT18P68-201ENST00000392293 1000 ntBASIC17.29■□□□□ 0.36
UBCP0CG48 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.29■□□□□ 0.36
UBCP0CG48 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
UBCP0CG48 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBCP0CG48 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.29■□□□□ 0.36
UBCP0CG48 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.29■□□□□ 0.36
UBCP0CG48 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
UBCP0CG48 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBCP0CG48 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBCP0CG48 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.28■□□□□ 0.36
UBCP0CG48 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
UBCP0CG48 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 AC016769.1-201ENST00000409132 1010 ntBASIC17.28■□□□□ 0.36
UBCP0CG48 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.28■□□□□ 0.36
UBCP0CG48 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.28■□□□□ 0.36
UBCP0CG48 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBCP0CG48 AC069236.1-201ENST00000604339 616 ntBASIC17.28■□□□□ 0.36
UBCP0CG48 MIR6821-201ENST00000617625 74 ntBASIC17.28■□□□□ 0.36
UBCP0CG48 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.28■□□□□ 0.36
UBCP0CG48 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 TNXA-203ENST00000507684 2038 ntBASIC17.28■□□□□ 0.36
UBCP0CG48 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBCP0CG48 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBCP0CG48 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
UBCP0CG48 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.27■□□□□ 0.36
UBCP0CG48 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBCP0CG48 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
UBCP0CG48 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.27■□□□□ 0.36
UBCP0CG48 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.27■□□□□ 0.36
UBCP0CG48 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBCP0CG48 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
UBCP0CG48 AC068338.2-201ENST00000563278 1430 ntBASIC17.27■□□□□ 0.35
UBCP0CG48 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.27■□□□□ 0.35
UBCP0CG48 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBCP0CG48 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBCP0CG48 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBCP0CG48 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms