Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CSF1P09603 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CSF1P09603 POU5F1P4-201ENST00000413175 1085 ntBASIC17.04■□□□□ 0.32
CSF1P09603 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.04■□□□□ 0.32
CSF1P09603 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CSF1P09603 AC008175.2-201ENST00000612840 297 ntBASIC17.04■□□□□ 0.32
CSF1P09603 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.04■□□□□ 0.32
CSF1P09603 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.04■□□□□ 0.32
CSF1P09603 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CSF1P09603 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.04■□□□□ 0.32
CSF1P09603 LINC01465-201ENST00000408887 1940 ntBASIC17.04■□□□□ 0.32
CSF1P09603 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.04■□□□□ 0.32
CSF1P09603 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.03■□□□□ 0.32
CSF1P09603 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.03■□□□□ 0.32
CSF1P09603 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CSF1P09603 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 AC116050.2-201ENST00000612102 1779 ntBASIC17.03■□□□□ 0.32
CSF1P09603 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.03■□□□□ 0.32
CSF1P09603 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSF1P09603 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.03■□□□□ 0.32
CSF1P09603 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.03■□□□□ 0.32
CSF1P09603 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.03■□□□□ 0.32
CSF1P09603 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.03■□□□□ 0.32
CSF1P09603 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSF1P09603 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSF1P09603 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSF1P09603 AL138781.2-201ENST00000617896 1843 ntBASIC17.03■□□□□ 0.32
CSF1P09603 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.02■□□□□ 0.32
CSF1P09603 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSF1P09603 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.02■□□□□ 0.32
CSF1P09603 AC006015.1-201ENST00000429970 570 ntBASIC17.02■□□□□ 0.32
CSF1P09603 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSF1P09603 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.02■□□□□ 0.32
CSF1P09603 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.02■□□□□ 0.32
CSF1P09603 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.02■□□□□ 0.32
CSF1P09603 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.02■□□□□ 0.32
CSF1P09603 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.02■□□□□ 0.32
CSF1P09603 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSF1P09603 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSF1P09603 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSF1P09603 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CSF1P09603 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CSF1P09603 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSF1P09603 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CSF1P09603 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSF1P09603 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
CSF1P09603 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.01■□□□□ 0.31
CSF1P09603 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CSF1P09603 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.01■□□□□ 0.31
CSF1P09603 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.01■□□□□ 0.31
CSF1P09603 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.01■□□□□ 0.31
CSF1P09603 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.01■□□□□ 0.31
CSF1P09603 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.01■□□□□ 0.31
CSF1P09603 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSF1P09603 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSF1P09603 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms