Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPB1P04440 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 AC020763.4-201ENST00000623414 4170 ntBASIC17.72■□□□□ 0.43
HLA-DPB1P04440 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.72■□□□□ 0.43
HLA-DPB1P04440 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DPB1P04440 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 AC006015.1-201ENST00000429970 570 ntBASIC17.71■□□□□ 0.43
HLA-DPB1P04440 KRT18P11-201ENST00000435214 1283 ntBASIC17.71■□□□□ 0.43
HLA-DPB1P04440 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 SLC7A5P1-201ENST00000568957 537 ntBASIC17.71■□□□□ 0.43
HLA-DPB1P04440 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DPB1P04440 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
HLA-DPB1P04440 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.71■□□□□ 0.42
HLA-DPB1P04440 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.7■□□□□ 0.42
HLA-DPB1P04440 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 AC011767.1-201ENST00000617410 1153 ntBASIC17.7■□□□□ 0.42
HLA-DPB1P04440 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 KRT8P36-201ENST00000489121 1440 ntBASIC17.7■□□□□ 0.42
HLA-DPB1P04440 RBM17P2-201ENST00000616397 1405 ntBASIC17.7■□□□□ 0.42
HLA-DPB1P04440 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DPB1P04440 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPB1P04440 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms