Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZNF253O75346 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF253O75346 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZNF253O75346 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 PGM5P4-201ENST00000421970 445 ntBASIC15.35■□□□□ 0.05
ZNF253O75346 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF253O75346 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ZNF253O75346 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZNF253O75346 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF253O75346 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF253O75346 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF253O75346 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
ZNF253O75346 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 LTB4R2-202ENST00000528054 3092 ntBASIC15.34■□□□□ 0.05
ZNF253O75346 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF253O75346 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ZNF253O75346 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF253O75346 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF253O75346 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF253O75346 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
ZNF253O75346 CDV3P1-201ENST00000471403 739 ntBASIC15.34■□□□□ 0.05
ZNF253O75346 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.34■□□□□ 0.05
ZNF253O75346 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF253O75346 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.34■□□□□ 0.05
ZNF253O75346 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.34■□□□□ 0.05
ZNF253O75346 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 HTR7P1-202ENST00000624664 4411 ntBASIC15.34■□□□□ 0.05
ZNF253O75346 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF253O75346 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF253O75346 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF253O75346 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ZNF253O75346 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF253O75346 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF253O75346 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF253O75346 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF253O75346 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF253O75346 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF253O75346 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF253O75346 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF253O75346 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF253O75346 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF253O75346 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF253O75346 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF253O75346 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF253O75346 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ZNF253O75346 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF253O75346 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF253O75346 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF253O75346 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF253O75346 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
ZNF253O75346 TERF1P2-201ENST00000583350 1212 ntBASIC15.32■□□□□ 0.04
ZNF253O75346 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms