Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC233702.5-201ENST00000584107 538 ntBASIC20.02■□□□□ 0.8
SMAD6O43541 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.02■□□□□ 0.8
SMAD6O43541 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMAD6O43541 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.02■□□□□ 0.79
SMAD6O43541 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMAD6O43541 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.02■□□□□ 0.79
SMAD6O43541 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.01■□□□□ 0.79
SMAD6O43541 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.01■□□□□ 0.79
SMAD6O43541 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SMAD6O43541 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SMAD6O43541 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.01■□□□□ 0.79
SMAD6O43541 MIR718-201ENST00000390190 70 ntBASIC20.01■□□□□ 0.79
SMAD6O43541 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.01■□□□□ 0.79
SMAD6O43541 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SMAD6O43541 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD6O43541 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
SMAD6O43541 HTR7P1-201ENST00000538670 1336 ntBASIC20.01■□□□□ 0.79
SMAD6O43541 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMAD6O43541 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMAD6O43541 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMAD6O43541 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SMAD6O43541 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SMAD6O43541 AC012618.2-201ENST00000428058 849 ntBASIC20■□□□□ 0.79
SMAD6O43541 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20■□□□□ 0.79
SMAD6O43541 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20■□□□□ 0.79
SMAD6O43541 AC004264.1-201ENST00000608354 794 ntBASIC20■□□□□ 0.79
SMAD6O43541 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20■□□□□ 0.79
SMAD6O43541 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMAD6O43541 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20■□□□□ 0.79
SMAD6O43541 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SMAD6O43541 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SMAD6O43541 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20■□□□□ 0.79
SMAD6O43541 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20■□□□□ 0.79
SMAD6O43541 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMAD6O43541 LINC01521-201ENST00000504184 1943 ntBASIC20■□□□□ 0.79
SMAD6O43541 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SMAD6O43541 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.99■□□□□ 0.79
SMAD6O43541 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SMAD6O43541 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
SMAD6O43541 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SMAD6O43541 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMAD6O43541 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMAD6O43541 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SMAD6O43541 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.99■□□□□ 0.79
SMAD6O43541 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.99■□□□□ 0.79
SMAD6O43541 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.99■□□□□ 0.79
SMAD6O43541 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.99■□□□□ 0.79
SMAD6O43541 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD6O43541 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.99■□□□□ 0.79
SMAD6O43541 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMAD6O43541 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SMAD6O43541 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD6O43541 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMAD6O43541 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SMAD6O43541 SNORA78-201ENST00000459373 127 ntBASIC19.98■□□□□ 0.79
SMAD6O43541 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD6O43541 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.98■□□□□ 0.79
SMAD6O43541 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD6O43541 AL049637.2-201ENST00000641778 930 ntBASIC19.98■□□□□ 0.79
SMAD6O43541 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.98■□□□□ 0.79
SMAD6O43541 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.98■□□□□ 0.79
SMAD6O43541 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMAD6O43541 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD6O43541 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms