Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 BX323043.1-201ENST00000641006 1765 ntBASIC18.25■□□□□ 0.51
ARHGEF9O43307 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 AC007322.3-201ENST00000426526 701 ntBASIC18.25■□□□□ 0.51
ARHGEF9O43307 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 AC105036.2-201ENST00000569468 176 ntBASIC18.25■□□□□ 0.51
ARHGEF9O43307 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF9O43307 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ARHGEF9O43307 AC020763.4-201ENST00000623414 4170 ntBASIC18.24■□□□□ 0.51
ARHGEF9O43307 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF9O43307 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 KRT18P29-201ENST00000397031 1267 ntBASIC18.24■□□□□ 0.51
ARHGEF9O43307 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.24■□□□□ 0.51
ARHGEF9O43307 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.24■□□□□ 0.51
ARHGEF9O43307 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF9O43307 AC133552.2-202ENST00000575694 574 ntBASIC18.24■□□□□ 0.51
ARHGEF9O43307 MIR4758-201ENST00000577688 71 ntBASIC18.24■□□□□ 0.51
ARHGEF9O43307 MIR4651-201ENST00000582622 73 ntBASIC18.24■□□□□ 0.51
ARHGEF9O43307 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ARHGEF9O43307 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF9O43307 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF9O43307 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.23■□□□□ 0.51
ARHGEF9O43307 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 AFG3L1P-217ENST00000557444 2447 ntBASIC18.22■□□□□ 0.51
ARHGEF9O43307 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 AL162377.1-201ENST00000618844 1793 ntBASIC18.22■□□□□ 0.51
ARHGEF9O43307 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF9O43307 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF9O43307 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms