Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RRP8O43159 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RRP8O43159 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
RRP8O43159 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.61■□□□□ 0.57
RRP8O43159 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 DUSP5P1-201ENST00000441325 1139 ntBASIC18.61■□□□□ 0.57
RRP8O43159 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.61■□□□□ 0.57
RRP8O43159 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 SLC25A1P4-201ENST00000567977 778 ntBASIC18.61■□□□□ 0.57
RRP8O43159 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.61■□□□□ 0.57
RRP8O43159 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.61■□□□□ 0.57
RRP8O43159 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RRP8O43159 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
RRP8O43159 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RRP8O43159 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RRP8O43159 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RRP8O43159 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RRP8O43159 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RRP8O43159 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RRP8O43159 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.6■□□□□ 0.57
RRP8O43159 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RRP8O43159 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.6■□□□□ 0.57
RRP8O43159 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.6■□□□□ 0.57
RRP8O43159 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.6■□□□□ 0.57
RRP8O43159 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.6■□□□□ 0.57
RRP8O43159 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RRP8O43159 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
RRP8O43159 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RRP8O43159 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.59■□□□□ 0.57
RRP8O43159 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 HCG4P8-203ENST00000443049 980 ntBASIC18.59■□□□□ 0.57
RRP8O43159 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.59■□□□□ 0.57
RRP8O43159 C1QL1P1-201ENST00000568105 661 ntBASIC18.59■□□□□ 0.57
RRP8O43159 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 AL031432.5-201ENST00000641059 760 ntBASIC18.59■□□□□ 0.57
RRP8O43159 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.59■□□□□ 0.57
RRP8O43159 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RRP8O43159 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RRP8O43159 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RRP8O43159 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RRP8O43159 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.58■□□□□ 0.57
RRP8O43159 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RRP8O43159 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RRP8O43159 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RRP8O43159 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.58■□□□□ 0.56
RRP8O43159 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.58■□□□□ 0.56
RRP8O43159 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.58■□□□□ 0.56
RRP8O43159 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.58■□□□□ 0.56
RRP8O43159 AL138966.2-201ENST00000621997 464 ntBASIC18.58■□□□□ 0.56
RRP8O43159 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.58■□□□□ 0.56
RRP8O43159 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.58■□□□□ 0.56
RRP8O43159 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RRP8O43159 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RRP8O43159 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RRP8O43159 AP006587.1-201ENST00000534129 1502 ntBASIC18.58■□□□□ 0.56
RRP8O43159 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RRP8O43159 KRT8P36-201ENST00000489121 1440 ntBASIC18.57■□□□□ 0.56
RRP8O43159 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.57■□□□□ 0.56
RRP8O43159 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 AC011484.1-201ENST00000377652 1995 ntBASIC18.57■□□□□ 0.56
RRP8O43159 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RRP8O43159 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms