Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NDUFA1O15239 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA1O15239 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 AC116050.2-201ENST00000612102 1779 ntBASIC13.5□□□□□ -0.25
NDUFA1O15239 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
NDUFA1O15239 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA1O15239 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA1O15239 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.5□□□□□ -0.25
NDUFA1O15239 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.5□□□□□ -0.25
NDUFA1O15239 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA1O15239 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.5□□□□□ -0.25
NDUFA1O15239 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.5□□□□□ -0.25
NDUFA1O15239 RARRES2P11-201ENST00000635158 484 ntBASIC13.5□□□□□ -0.25
NDUFA1O15239 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NDUFA1O15239 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA1O15239 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA1O15239 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA1O15239 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA1O15239 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.49□□□□□ -0.25
NDUFA1O15239 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NDUFA1O15239 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.49□□□□□ -0.25
NDUFA1O15239 AC005837.3-201ENST00000612163 286 ntBASIC13.49□□□□□ -0.25
NDUFA1O15239 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA1O15239 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA1O15239 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 AC020763.4-201ENST00000623414 4170 ntBASIC13.49□□□□□ -0.25
NDUFA1O15239 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA1O15239 AC079598.2-202ENST00000546624 1451 ntBASIC13.48□□□□□ -0.25
NDUFA1O15239 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NDUFA1O15239 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA1O15239 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA1O15239 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA1O15239 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA1O15239 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms