Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CAPN9O14815 AC099778.1-201ENST00000568593 1911 ntBASIC20.84■□□□□ 0.93
CAPN9O14815 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.84■□□□□ 0.93
CAPN9O14815 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN9O14815 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.83■□□□□ 0.93
CAPN9O14815 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.83■□□□□ 0.93
CAPN9O14815 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN9O14815 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN9O14815 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CAPN9O14815 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN9O14815 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CAPN9O14815 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CAPN9O14815 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN9O14815 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN9O14815 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CAPN9O14815 KRT17P3-201ENST00000420566 1262 ntBASIC20.83■□□□□ 0.93
CAPN9O14815 POU5F1P3-201ENST00000428824 1078 ntBASIC20.83■□□□□ 0.93
CAPN9O14815 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN9O14815 AC008403.3-201ENST00000598924 454 ntBASIC20.83■□□□□ 0.93
CAPN9O14815 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.83■□□□□ 0.93
CAPN9O14815 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN9O14815 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN9O14815 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CAPN9O14815 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CAPN9O14815 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CAPN9O14815 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 POM121L13P-201ENST00000422362 380 ntBASIC20.82■□□□□ 0.92
CAPN9O14815 RPS2P52-201ENST00000469610 820 ntBASIC20.82■□□□□ 0.92
CAPN9O14815 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN9O14815 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.82■□□□□ 0.92
CAPN9O14815 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.82■□□□□ 0.92
CAPN9O14815 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN9O14815 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.82■□□□□ 0.92
CAPN9O14815 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.82■□□□□ 0.92
CAPN9O14815 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN9O14815 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN9O14815 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN9O14815 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CAPN9O14815 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN9O14815 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN9O14815 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN9O14815 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN9O14815 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.81■□□□□ 0.92
CAPN9O14815 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN9O14815 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN9O14815 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN9O14815 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN9O14815 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN9O14815 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN9O14815 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CAPN9O14815 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN9O14815 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CAPN9O14815 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CAPN9O14815 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CAPN9O14815 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CAPN9O14815 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN9O14815 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN9O14815 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.8■□□□□ 0.92
CAPN9O14815 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.8■□□□□ 0.92
CAPN9O14815 AC006058.3-201ENST00000606217 1069 ntBASIC20.8■□□□□ 0.92
CAPN9O14815 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CAPN9O14815 AC124283.5-201ENST00000624661 1809 ntBASIC20.8■□□□□ 0.92
CAPN9O14815 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN9O14815 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN9O14815 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN9O14815 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CAPN9O14815 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN9O14815 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CAPN9O14815 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN9O14815 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN9O14815 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CAPN9O14815 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN9O14815 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN9O14815 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms