Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFA4O00483 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.17■□□□□ 0.02
NDUFA4O00483 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.17■□□□□ 0.02
NDUFA4O00483 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NDUFA4O00483 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.17■□□□□ 0.02
NDUFA4O00483 AC018553.1-201ENST00000616682 1458 ntBASIC15.17■□□□□ 0.02
NDUFA4O00483 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NDUFA4O00483 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.17■□□□□ 0.02
NDUFA4O00483 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.17■□□□□ 0.02
NDUFA4O00483 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NDUFA4O00483 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.17■□□□□ 0.02
NDUFA4O00483 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NDUFA4O00483 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NDUFA4O00483 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.17■□□□□ 0.02
NDUFA4O00483 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFA4O00483 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
NDUFA4O00483 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NDUFA4O00483 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.16■□□□□ 0.02
NDUFA4O00483 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 RPS2P52-201ENST00000469610 820 ntBASIC15.16■□□□□ 0.02
NDUFA4O00483 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.16■□□□□ 0.02
NDUFA4O00483 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
NDUFA4O00483 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.16■□□□□ 0.02
NDUFA4O00483 AL121906.2-201ENST00000621597 723 ntBASIC15.16■□□□□ 0.02
NDUFA4O00483 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NDUFA4O00483 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 AFG3L1P-217ENST00000557444 2447 ntBASIC15.16■□□□□ 0.02
NDUFA4O00483 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.16■□□□□ 0.02
NDUFA4O00483 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NDUFA4O00483 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.16■□□□□ 0.02
NDUFA4O00483 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.16■□□□□ 0.02
NDUFA4O00483 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.16■□□□□ 0.02
NDUFA4O00483 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFA4O00483 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFA4O00483 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
NDUFA4O00483 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFA4O00483 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFA4O00483 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.15■□□□□ 0.02
NDUFA4O00483 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.15■□□□□ 0.02
NDUFA4O00483 SOX15-203ENST00000570788 1093 ntBASIC15.15■□□□□ 0.02
NDUFA4O00483 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.15■□□□□ 0.02
NDUFA4O00483 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFA4O00483 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NDUFA4O00483 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.15■□□□□ 0.02
NDUFA4O00483 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.15■□□□□ 0.02
NDUFA4O00483 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.15■□□□□ 0.02
NDUFA4O00483 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFA4O00483 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.15■□□□□ 0.02
NDUFA4O00483 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA4O00483 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFA4O00483 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDUFA4O00483 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFA4O00483 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
NDUFA4O00483 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms