Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.31■□□□□ 0.68
TAF4O00268 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TAF4O00268 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
TAF4O00268 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
TAF4O00268 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
TAF4O00268 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 KRT18P22-201ENST00000402024 1347 ntBASIC19.3■□□□□ 0.68
TAF4O00268 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
TAF4O00268 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.3■□□□□ 0.68
TAF4O00268 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.3■□□□□ 0.68
TAF4O00268 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TAF4O00268 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
TAF4O00268 SLC25A3P1-201ENST00000443844 931 ntBASIC19.3■□□□□ 0.68
TAF4O00268 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.3■□□□□ 0.68
TAF4O00268 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
TAF4O00268 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.3■□□□□ 0.68
TAF4O00268 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.3■□□□□ 0.68
TAF4O00268 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.3■□□□□ 0.68
TAF4O00268 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.3■□□□□ 0.68
TAF4O00268 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.3■□□□□ 0.68
TAF4O00268 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TAF4O00268 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TAF4O00268 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.29■□□□□ 0.68
TAF4O00268 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TAF4O00268 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TAF4O00268 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.29■□□□□ 0.68
TAF4O00268 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.29■□□□□ 0.68
TAF4O00268 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.29■□□□□ 0.68
TAF4O00268 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 AC007322.3-201ENST00000426526 701 ntBASIC19.29■□□□□ 0.68
TAF4O00268 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.29■□□□□ 0.68
TAF4O00268 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.29■□□□□ 0.68
TAF4O00268 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.29■□□□□ 0.68
TAF4O00268 AC010947.1-201ENST00000623454 693 ntBASIC19.29■□□□□ 0.68
TAF4O00268 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TAF4O00268 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TAF4O00268 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TAF4O00268 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.28■□□□□ 0.68
TAF4O00268 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.28■□□□□ 0.68
TAF4O00268 UNC93B2-201ENST00000285383 730 ntBASIC19.28■□□□□ 0.68
TAF4O00268 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TAF4O00268 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.28■□□□□ 0.68
TAF4O00268 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 KRT18P56-201ENST00000507275 550 ntBASIC19.28■□□□□ 0.68
TAF4O00268 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 REXO1L10P-201ENST00000615707 1290 ntBASIC19.28■□□□□ 0.68
TAF4O00268 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.28■□□□□ 0.68
TAF4O00268 AL358472.4-201ENST00000633140 710 ntBASIC19.28■□□□□ 0.68
TAF4O00268 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 LINC01006-201ENST00000333319 2292 ntBASIC19.28■□□□□ 0.68
TAF4O00268 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TAF4O00268 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TAF4O00268 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
TAF4O00268 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TAF4O00268 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TAF4O00268 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TAF4O00268 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TAF4O00268 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TAF4O00268 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.27■□□□□ 0.68
TAF4O00268 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.27■□□□□ 0.68
TAF4O00268 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms