Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 AC243732.1-201ENST00000612648 864 ntBASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.13■■□□□ 1.13
SPDYE4A6NLX3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 AC060766.1-201ENST00000590824 627 ntBASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SPDYE4A6NLX3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.11■■□□□ 1.13
SPDYE4A6NLX3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 AL049796.1-201ENST00000565336 1766 ntBASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 CDV3P1-201ENST00000471403 739 ntBASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 UNC93B4-201ENST00000505679 747 ntBASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.1■■□□□ 1.13
SPDYE4A6NLX3 AP003097.1-201ENST00000530657 1135 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms