Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TUBAL3A6NHL2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.74■□□□□ 0.43
TUBAL3A6NHL2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 AC124016.1-201ENST00000609552 612 ntBASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBAL3A6NHL2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 RPS2P55-201ENST00000397318 883 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 AC133681.1-201ENST00000465482 601 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 AC107956.1-201ENST00000494359 873 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 AC233702.5-201ENST00000584107 538 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 REXO1L12P-201ENST00000622156 912 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 AL135905.2-201ENST00000584934 1404 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBAL3A6NHL2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 AC110285.5-201ENST00000611501 352 ntBASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 AFG3L1P-217ENST00000557444 2447 ntBASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBAL3A6NHL2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TUBAL3A6NHL2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBAL3A6NHL2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBAL3A6NHL2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBAL3A6NHL2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBAL3A6NHL2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBAL3A6NHL2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms